Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm10132-201ENSMUST00000099431 468 ntBASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Il1f5-202ENSMUST00000114490 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Gm43420-201ENSMUST00000198012 1857 ntBASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Gm15189-201ENSMUST00000121164 1966 ntBASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim39Q9ESN2 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 9230102K24Rik-201ENSMUST00000219459 1303 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Dtna-201ENSMUST00000047954 1596 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm1988-201ENSMUST00000188190 2565 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm24542-201ENSMUST00000103870 110 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm11897-201ENSMUST00000121976 828 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm13673-201ENSMUST00000122056 531 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm12819-201ENSMUST00000122223 629 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm13194-201ENSMUST00000142299 311 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm25551-201ENSMUST00000158082 103 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm6921-201ENSMUST00000161478 435 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm17068-201ENSMUST00000163135 980 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Mir7659-201ENSMUST00000184079 58 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm29263-201ENSMUST00000188718 463 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm28414-201ENSMUST00000190111 294 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm45295-201ENSMUST00000210393 1046 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm3379-201ENSMUST00000222259 642 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm18338-201ENSMUST00000222381 560 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Olfr45-201ENSMUST00000084454 1035 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm37334-201ENSMUST00000192325 2938 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.56□□□□□ -1.2
Trim39Q9ESN2 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim39Q9ESN2 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim39Q9ESN2 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.55□□□□□ -1.2
Trim39Q9ESN2 AC079245.1-201ENSMUST00000215680 1454 ntBASIC7.55□□□□□ -1.2
Trim39Q9ESN2 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim39Q9ESN2 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim39Q9ESN2 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim39Q9ESN2 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 158.7 ms