Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm35172-201ENSMUST00000196037 2649 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Rnf19a-203ENSMUST00000228358 3452 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm22022-201ENSMUST00000104355 127 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm7803-201ENSMUST00000117176 1015 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm14016-201ENSMUST00000119095 486 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm21990-201ENSMUST00000124692 383 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Traj54-201ENSMUST00000165071 54 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm15251-201ENSMUST00000177947 883 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Mir7029-201ENSMUST00000184777 61 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm29598-201ENSMUST00000188996 588 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm6197-201ENSMUST00000192273 454 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm38078-201ENSMUST00000192771 392 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm35212-201ENSMUST00000196672 606 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm43198-201ENSMUST00000200927 326 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm44245-201ENSMUST00000204304 232 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 CT030166.1-201ENSMUST00000222654 357 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 CT009733.1-202ENSMUST00000224941 441 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm17083-201ENSMUST00000165849 1366 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 AC133598.5-201ENSMUST00000224937 1517 ntBASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ube3bQ9ES34 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm43623-201ENSMUST00000199289 2663 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm29730-201ENSMUST00000192986 1396 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 AC166159.1-201ENSMUST00000227154 1380 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm14584-201ENSMUST00000118956 637 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm11798-201ENSMUST00000119150 421 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm18775-201ENSMUST00000190763 586 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm37383-201ENSMUST00000191750 745 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm6362-201ENSMUST00000217686 836 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 AC192334.2-201ENSMUST00000223087 1091 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 AC158981.1-201ENSMUST00000226943 1205 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm6807-201ENSMUST00000077435 888 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Olfr192-201ENSMUST00000080251 925 ntBASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ube3bQ9ES34 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms