Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp2aQ9DB34 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp2aQ9DB34 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.37□□□□□ -1.23
Chmp2aQ9DB34 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp2aQ9DB34 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp2aQ9DB34 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Chmp2aQ9DB34 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Chmp2aQ9DB34 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm22781-201ENSMUST00000104083 137 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm14251-201ENSMUST00000122133 279 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm14728-201ENSMUST00000122196 492 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm17149-201ENSMUST00000164712 375 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm4613-201ENSMUST00000165488 276 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm27018-201ENSMUST00000181136 225 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm26528-201ENSMUST00000181965 283 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Chmp2aQ9DB34 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm14802-201ENSMUST00000121944 1885 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm13878-201ENSMUST00000117986 577 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm15153-201ENSMUST00000119867 274 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm25505-201ENSMUST00000157220 246 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm27866-201ENSMUST00000184459 171 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm18699-201ENSMUST00000190713 243 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm37322-201ENSMUST00000193409 337 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm38170-201ENSMUST00000195404 816 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Chmp2aQ9DB34 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms