Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm18637-201ENSMUST00000217665 1900 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm3822-201ENSMUST00000201941 2935 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Ephx2-202ENSMUST00000224698 1985 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm26016-201ENSMUST00000104403 129 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm14489-201ENSMUST00000120868 901 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Mir1900-201ENSMUST00000122714 78 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm25413-201ENSMUST00000158544 312 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm3585-201ENSMUST00000173438 875 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm27864-201ENSMUST00000183704 190 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm18382-201ENSMUST00000194394 582 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm5885-202ENSMUST00000203357 528 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm45269-201ENSMUST00000210359 282 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 AC154594.1-201ENSMUST00000225171 1273 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 AC154738.1-201ENSMUST00000227054 368 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm22362-201ENSMUST00000083102 134 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nkx6-1Q99MA9 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm7821-201ENSMUST00000117111 788 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm14279-201ENSMUST00000117142 332 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm13414-201ENSMUST00000117516 727 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm10243-201ENSMUST00000117571 333 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm11810-201ENSMUST00000118311 333 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm13495-201ENSMUST00000121156 537 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC7.31□□□□□ -1.24
Nkx6-1Q99MA9 Gm18594-201ENSMUST00000175733 1403 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms