Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.28□□□□□ -1.08
Clp1Q99LI9 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.28□□□□□ -1.08
Clp1Q99LI9 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Clp1Q99LI9 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
Clp1Q99LI9 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Clp1Q99LI9 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Clp1Q99LI9 Gm42981-201ENSMUST00000200184 3252 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 AC169038.1-201ENSMUST00000227378 1352 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm16383-201ENSMUST00000118122 232 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm11810-201ENSMUST00000118311 333 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm14824-201ENSMUST00000119421 737 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm8916-201ENSMUST00000119732 949 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm13118-201ENSMUST00000120402 549 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Mir1903-201ENSMUST00000122574 80 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm9890-201ENSMUST00000171867 537 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm25692-201ENSMUST00000175444 125 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm27044-201ENSMUST00000183033 796 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm18342-201ENSMUST00000186987 694 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm2427-201ENSMUST00000189121 881 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm8209-201ENSMUST00000206386 553 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm18855-201ENSMUST00000206689 570 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm44800-201ENSMUST00000207510 1855 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.27□□□□□ -1.09
Clp1Q99LI9 Gm45534-201ENSMUST00000211449 2339 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm43465-201ENSMUST00000200367 2802 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm13195-201ENSMUST00000117229 261 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm12307-201ENSMUST00000120581 590 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.26□□□□□ -1.09
Clp1Q99LI9 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.26□□□□□ -1.09
Clp1Q99LI9 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm19066-201ENSMUST00000193232 1078 ntBASIC8.26□□□□□ -1.09
Clp1Q99LI9 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Clp1Q99LI9 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms