Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Lrif1Q8CDD9 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm11987-201ENSMUST00000118524 381 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm13038-201ENSMUST00000119886 459 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm7502-201ENSMUST00000169235 733 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm24923-201ENSMUST00000178201 88 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm28413-201ENSMUST00000189369 291 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm28164-201ENSMUST00000190143 442 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm18765-201ENSMUST00000203166 660 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm26130-201ENSMUST00000083171 138 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lrif1Q8CDD9 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm25083-201ENSMUST00000102319 92 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm23701-201ENSMUST00000103893 110 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm22439-201ENSMUST00000104048 132 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm15913-201ENSMUST00000118492 331 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm5809-201ENSMUST00000121854 529 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm23392-201ENSMUST00000157580 113 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm27218-201ENSMUST00000183745 392 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm43558-201ENSMUST00000200155 210 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.97□□□□□ -1.29
Lrif1Q8CDD9 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms