Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Atg4aQ8C9S8 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm14904-201ENSMUST00000117067 335 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm13423-201ENSMUST00000117205 888 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 BC064078-201ENSMUST00000122939 570 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Mir1981-201ENSMUST00000157934 82 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm23891-201ENSMUST00000158114 138 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm17212-201ENSMUST00000166666 259 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm19092-201ENSMUST00000209036 969 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm5080-201ENSMUST00000220341 743 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Atg4aQ8C9S8 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm25396-201ENSMUST00000103981 133 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm25631-201ENSMUST00000104390 130 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm15158-201ENSMUST00000120577 570 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm13237-201ENSMUST00000122151 635 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm25969-201ENSMUST00000157166 132 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm23077-201ENSMUST00000157854 116 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm22728-201ENSMUST00000158087 129 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm2976-201ENSMUST00000160362 513 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm7651-201ENSMUST00000173398 901 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm4525-201ENSMUST00000198831 254 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm37593-201ENSMUST00000191669 3254 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Atg4aQ8C9S8 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.48□□□□□ -1.05
Atg4aQ8C9S8 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms