Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm9506-201ENSMUST00000118516 320 ntBASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm23968-201ENSMUST00000175047 125 ntBASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm44566-201ENSMUST00000207638 304 ntBASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Col6a6Q8C6K9 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm5390-201ENSMUST00000119069 1230 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm26410-201ENSMUST00000157670 261 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm24687-201ENSMUST00000157758 241 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm22518-201ENSMUST00000158267 68 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Mir3068-201ENSMUST00000083004 136 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm7166-201ENSMUST00000199715 303 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm4042-201ENSMUST00000216946 637 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm43890-201ENSMUST00000203437 2799 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Gm35808-201ENSMUST00000204769 2602 ntBASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Col6a6Q8C6K9 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col6a6Q8C6K9 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms