Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc40Q8BI79 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm13545-201ENSMUST00000119044 482 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm15160-201ENSMUST00000120553 907 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Mir1231-201ENSMUST00000175639 81 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm27218-201ENSMUST00000183745 392 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Ccdc40Q8BI79 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm25276-201ENSMUST00000104300 124 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm11954-201ENSMUST00000121403 349 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm22311-201ENSMUST00000158006 110 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm19840-201ENSMUST00000169624 882 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Mir3072-201ENSMUST00000175610 83 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm26729-201ENSMUST00000180744 352 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm37295-201ENSMUST00000192186 109 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm35108-201ENSMUST00000194321 699 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm38305-201ENSMUST00000194825 223 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm33191-201ENSMUST00000195604 699 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm5154-201ENSMUST00000203971 399 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm45478-201ENSMUST00000209472 211 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm45497-201ENSMUST00000211701 740 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 Gm46379-201ENSMUST00000222551 265 ntBASIC7.47□□□□□ -1.21
Ccdc40Q8BI79 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms