Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Nup98Q6PFD9 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Mir425-201ENSMUST00000083645 85 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm26340-201ENSMUST00000102365 99 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm23979-201ENSMUST00000104071 128 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm14733-201ENSMUST00000117680 133 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm11581-201ENSMUST00000122024 763 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm25660-201ENSMUST00000158470 104 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm24032-201ENSMUST00000083932 159 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Nup98Q6PFD9 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm37084-201ENSMUST00000191688 5898 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm13006-201ENSMUST00000118683 214 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm12369-201ENSMUST00000121343 942 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm8648-201ENSMUST00000122457 221 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm25717-201ENSMUST00000158631 353 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm28413-201ENSMUST00000189369 291 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm43689-201ENSMUST00000195951 427 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm29784-201ENSMUST00000196217 406 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Nup98Q6PFD9 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.23□□□□□ -1.09
Nup98Q6PFD9 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Gm4992-201ENSMUST00000120256 768 ntBASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Gm14746-201ENSMUST00000120309 741 ntBASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Gm23426-201ENSMUST00000122483 318 ntBASIC8.22□□□□□ -1.09
Nup98Q6PFD9 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Gm22428-201ENSMUST00000158554 132 ntBASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC8.22□□□□□ -1.09
Nup98Q6PFD9 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms