Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm44387-201ENSMUST00000196298 145 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm43108-201ENSMUST00000200525 293 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm44380-201ENSMUST00000203125 293 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm20136-201ENSMUST00000207501 891 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm19186-201ENSMUST00000219922 333 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Syne3Q4FZC9 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm5752-201ENSMUST00000117771 594 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm12813-201ENSMUST00000119615 902 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm37689-201ENSMUST00000193139 275 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm23011-202ENSMUST00000197855 275 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm7285-201ENSMUST00000198801 580 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm19540-201ENSMUST00000221843 810 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 AC154487.1-201ENSMUST00000224649 226 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm20900-201ENSMUST00000078729 472 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Syne3Q4FZC9 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Syne3Q4FZC9 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms