Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Smarcc1P97496 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm43750-201ENSMUST00000199027 2493 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm38302-201ENSMUST00000191676 2076 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC9.11□□□□□ -0.95
Smarcc1P97496 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm12661-201ENSMUST00000118780 3335 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm14116-201ENSMUST00000117733 805 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm13176-201ENSMUST00000117910 477 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm4732-201ENSMUST00000118778 473 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm11445-201ENSMUST00000119101 532 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm12507-201ENSMUST00000119155 415 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm5166-201ENSMUST00000121332 573 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm12778-201ENSMUST00000122341 333 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm25969-201ENSMUST00000157166 132 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm25395-201ENSMUST00000157343 272 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Mir1929-201ENSMUST00000158635 93 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm27602-201ENSMUST00000183861 111 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm10925-201ENSMUST00000189941 678 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Ighv1-14-201ENSMUST00000194015 402 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm5717-201ENSMUST00000198243 1062 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm8190-201ENSMUST00000199603 586 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm19175-201ENSMUST00000199895 916 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm18995-201ENSMUST00000202981 520 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm43905-201ENSMUST00000204516 204 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC9.11□□□□□ -0.95
Smarcc1P97496 Gm45497-201ENSMUST00000211701 740 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC9.11□□□□□ -0.95
Smarcc1P97496 AC121542.2-201ENSMUST00000227529 400 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 AC123917.1-201ENSMUST00000228063 1048 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smarcc1P97496 n-R5s217-201ENSMUST00000083341 116 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Smarcc1P97496 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smarcc1P97496 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.11□□□□□ -0.95
Smarcc1P97496 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Smarcc1P97496 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Smarcc1P97496 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smarcc1P97496 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm9874-202ENSMUST00000194957 1464 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm14938-201ENSMUST00000119482 943 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm12372-201ENSMUST00000121654 768 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm4886-201ENSMUST00000121874 1176 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm5871-201ENSMUST00000176461 718 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm35108-201ENSMUST00000194321 699 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm33191-201ENSMUST00000195604 699 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm44411-201ENSMUST00000204172 349 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 CT025523.1-201ENSMUST00000228318 694 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smarcc1P97496 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Gm42535-201ENSMUST00000197312 1399 ntBASIC9.1□□□□□ -0.95
Smarcc1P97496 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smarcc1P97496 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smarcc1P97496 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smarcc1P97496 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smarcc1P97496 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smarcc1P97496 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms