Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC7.68□□□□□ -1.18
NcanP55066 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.68□□□□□ -1.18
NcanP55066 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC7.67□□□□□ -1.18
NcanP55066 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.67□□□□□ -1.18
NcanP55066 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Gm14018-201ENSMUST00000119042 455 ntBASIC7.67□□□□□ -1.18
NcanP55066 Gm14601-201ENSMUST00000120892 236 ntBASIC7.67□□□□□ -1.18
NcanP55066 Gm6428-201ENSMUST00000161062 345 ntBASIC7.67□□□□□ -1.18
NcanP55066 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.67□□□□□ -1.18
NcanP55066 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NcanP55066 Gm25690-201ENSMUST00000175439 77 ntBASIC7.67□□□□□ -1.18
NcanP55066 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Gm29784-201ENSMUST00000196217 406 ntBASIC7.67□□□□□ -1.18
NcanP55066 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.67□□□□□ -1.18
NcanP55066 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.67□□□□□ -1.18
NcanP55066 Gm45026-201ENSMUST00000205292 833 ntBASIC7.67□□□□□ -1.18
NcanP55066 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.67□□□□□ -1.18
NcanP55066 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.67□□□□□ -1.18
NcanP55066 Gm4556-201ENSMUST00000217808 355 ntBASIC7.67□□□□□ -1.18
NcanP55066 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
NcanP55066 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.67□□□□□ -1.18
NcanP55066 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 AC093043.2-201ENSMUST00000228616 2017 ntBASIC7.67□□□□□ -1.18
NcanP55066 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NcanP55066 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NcanP55066 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.67□□□□□ -1.18
NcanP55066 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NcanP55066 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NcanP55066 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 Gm26429-201ENSMUST00000104829 110 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm15073-201ENSMUST00000117432 634 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm4919-201ENSMUST00000117825 604 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm15568-201ENSMUST00000118589 1213 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm7113-201ENSMUST00000120477 958 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm6451-201ENSMUST00000121488 717 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.66□□□□□ -1.18
NcanP55066 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Gm22277-201ENSMUST00000157204 277 ntBASIC7.66□□□□□ -1.18
NcanP55066 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Gm35108-201ENSMUST00000194321 699 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm33191-201ENSMUST00000195604 699 ntBASIC7.66□□□□□ -1.18
NcanP55066 Gm42767-201ENSMUST00000198583 632 ntBASIC7.66□□□□□ -1.18
NcanP55066 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.66□□□□□ -1.18
NcanP55066 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC7.66□□□□□ -1.18
NcanP55066 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.66□□□□□ -1.18
NcanP55066 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Klf5-202ENSMUST00000226784 2852 ntBASIC7.66□□□□□ -1.18
NcanP55066 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.66□□□□□ -1.18
NcanP55066 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NcanP55066 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NcanP55066 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
NcanP55066 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
NcanP55066 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
NcanP55066 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 123.6 ms