Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm19185-201ENSMUST00000196365 643 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm18592-201ENSMUST00000221529 276 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Gm9293-201ENSMUST00000223096 306 ntBASIC9.32□□□□□ -0.92
Col18a1P39061 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col18a1P39061 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col18a1P39061 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col18a1P39061 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col18a1P39061 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Gm7435-202ENSMUST00000216003 2424 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC9.31□□□□□ -0.92
Col18a1P39061 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Col18a1P39061 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Col18a1P39061 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Col18a1P39061 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Gm31049-201ENSMUST00000201516 1302 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Gm12752-201ENSMUST00000121657 811 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Gm14457-201ENSMUST00000148069 1161 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Gm23674-201ENSMUST00000157473 131 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Gm24733-201ENSMUST00000158863 253 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Gm27018-201ENSMUST00000181136 225 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC9.31□□□□□ -0.92
Col18a1P39061 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC9.31□□□□□ -0.92
Col18a1P39061 Olfr809-203ENSMUST00000218237 1100 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Olfr1153-201ENSMUST00000052300 957 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col18a1P39061 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
Col18a1P39061 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Gm18879-201ENSMUST00000221187 1537 ntBASIC9.31□□□□□ -0.92
Col18a1P39061 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Col18a1P39061 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col18a1P39061 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col18a1P39061 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC9.31□□□□□ -0.92
Col18a1P39061 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Col18a1P39061 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Gm20615-201ENSMUST00000177503 705 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Mir6986-201ENSMUST00000184483 58 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Gm37375-201ENSMUST00000193859 387 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Gm37385-201ENSMUST00000195223 387 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC9.3□□□□□ -0.92
Col18a1P39061 Gm43798-201ENSMUST00000202056 394 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Gm44770-201ENSMUST00000205395 1264 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC9.3□□□□□ -0.92
Col18a1P39061 AC139197.1-201ENSMUST00000228332 813 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Col18a1P39061 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Col18a1P39061 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Gm45297-201ENSMUST00000209893 3483 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Gm43982-201ENSMUST00000204995 1829 ntBASIC9.3□□□□□ -0.92
Col18a1P39061 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col18a1P39061 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Col18a1P39061 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC9.3□□□□□ -0.92
Col18a1P39061 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col18a1P39061 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC9.3□□□□□ -0.92
Col18a1P39061 Gm15078-201ENSMUST00000118371 782 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Gm16179-201ENSMUST00000120685 373 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC9.29□□□□□ -0.92
Col18a1P39061 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 AC154573.2-201ENSMUST00000224174 378 ntBASIC9.29□□□□□ -0.92
Col18a1P39061 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col18a1P39061 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col18a1P39061 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms