Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm18907-201ENSMUST00000209719 932 ntBASIC7.25□□□□□ -1.25
Hoxa9P09631 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.25□□□□□ -1.25
Hoxa9P09631 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.25□□□□□ -1.25
Hoxa9P09631 Gm46424-201ENSMUST00000221567 168 ntBASIC7.25□□□□□ -1.25
Hoxa9P09631 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.25□□□□□ -1.25
Hoxa9P09631 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Hoxa9P09631 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxa9P09631 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxa9P09631 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Hoxa9P09631 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.25□□□□□ -1.25
Hoxa9P09631 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxa9P09631 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.25□□□□□ -1.25
Hoxa9P09631 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.25□□□□□ -1.25
Hoxa9P09631 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Hoxa9P09631 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Hoxa9P09631 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxa9P09631 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Hoxa9P09631 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxa9P09631 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm26357-201ENSMUST00000158218 115 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm17022-201ENSMUST00000166415 922 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm29156-201ENSMUST00000187764 499 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm43546-201ENSMUST00000196721 943 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm42713-201ENSMUST00000202709 945 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm45136-201ENSMUST00000205793 943 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.24□□□□□ -1.25
Hoxa9P09631 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.24□□□□□ -1.25
Hoxa9P09631 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxa9P09631 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Hoxa9P09631 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxa9P09631 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Hoxa9P09631 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxa9P09631 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Hoxa9P09631 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.23□□□□□ -1.25
Hoxa9P09631 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.23□□□□□ -1.25
Hoxa9P09631 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxa9P09631 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxa9P09631 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxa9P09631 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxa9P09631 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms