Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm8688-201ENSMUST00000118240 969 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm13690-201ENSMUST00000118989 285 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm14906-201ENSMUST00000119265 390 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm15186-201ENSMUST00000119345 563 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm13622-201ENSMUST00000120658 433 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm13828-201ENSMUST00000122278 363 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm23467-201ENSMUST00000157127 159 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm26167-201ENSMUST00000158423 253 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm9286-201ENSMUST00000173586 508 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm17867-201ENSMUST00000188981 391 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm37809-201ENSMUST00000195050 931 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm37929-201ENSMUST00000195116 493 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm31306-201ENSMUST00000197517 508 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm45299-201ENSMUST00000210199 420 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm46136-201ENSMUST00000214730 565 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 AC124569.4-201ENSMUST00000223830 1220 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 AC123867.1-201ENSMUST00000224990 816 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm5087-204ENSMUST00000225820 645 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm18594-201ENSMUST00000175733 1403 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm23192-201ENSMUST00000102434 96 ntBASIC6.82□□□□□ -1.32
Pcdh1F7BJK1 Gm8569-201ENSMUST00000117630 647 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms