Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm22438-201ENSMUST00000104049 132 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm14904-201ENSMUST00000117067 335 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm22795-201ENSMUST00000157233 118 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm26357-201ENSMUST00000158218 115 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm7420-201ENSMUST00000162836 842 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm17149-201ENSMUST00000164712 375 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm22119-201ENSMUST00000175594 99 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Pea15b-201ENSMUST00000182806 387 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm44471-201ENSMUST00000197963 100 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm30646-201ENSMUST00000207662 180 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm18562-201ENSMUST00000209949 915 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdc40Q9DC48 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm26016-201ENSMUST00000104403 129 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm14202-201ENSMUST00000120121 311 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm13525-201ENSMUST00000120607 478 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm7599-201ENSMUST00000121453 796 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm13282-201ENSMUST00000121577 545 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm21839-201ENSMUST00000179536 378 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm18501-201ENSMUST00000185363 664 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm19764-201ENSMUST00000203630 649 ntBASIC6.66□□□□□ -1.34
Cdc40Q9DC48 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdc40Q9DC48 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms