Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm19840-201ENSMUST00000169624 882 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Mir3062-201ENSMUST00000174986 105 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm29519-201ENSMUST00000186994 398 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm44312-201ENSMUST00000203536 469 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm3785-201ENSMUST00000221000 202 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm2762-207ENSMUST00000202739 2665 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm5324-201ENSMUST00000208115 476 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm20236-201ENSMUST00000193037 4540 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm37094-201ENSMUST00000193352 4540 ntBASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Cdh23Q99PF4 Gm14836-201ENSMUST00000118567 471 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm11585-201ENSMUST00000120901 569 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm18348-201ENSMUST00000191227 820 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm15801-201ENSMUST00000120920 522 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm8783-201ENSMUST00000159764 522 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm2959-201ENSMUST00000169844 621 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm28934-201ENSMUST00000186491 346 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm18995-201ENSMUST00000202981 520 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm18805-201ENSMUST00000206872 655 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm5582-201ENSMUST00000075251 522 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Cdh23Q99PF4 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Cdh23Q99PF4 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cdh23Q99PF4 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Cdh23Q99PF4 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cdh23Q99PF4 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cdh23Q99PF4 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cdh23Q99PF4 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms