Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 CT025642.2-201ENSMUST00000225009 1649 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm6490-201ENSMUST00000111862 461 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm13771-201ENSMUST00000117988 238 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm11810-201ENSMUST00000118311 333 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm15913-201ENSMUST00000118492 331 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm13690-201ENSMUST00000118989 285 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm13532-201ENSMUST00000120373 240 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm14465-201ENSMUST00000120603 567 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm23079-201ENSMUST00000157847 117 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm20797-201ENSMUST00000177894 383 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm43558-201ENSMUST00000200155 210 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 AC192088.2-201ENSMUST00000227590 411 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.97□□□□□ -1.29
Clrn1Q8K445 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Clrn1Q8K445 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.96□□□□□ -1.29
Clrn1Q8K445 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Clrn1Q8K445 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Clrn1Q8K445 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.29
Clrn1Q8K445 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.96□□□□□ -1.29
Clrn1Q8K445 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm23701-201ENSMUST00000103893 110 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm6746-201ENSMUST00000108774 483 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm15422-201ENSMUST00000117453 541 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm13163-201ENSMUST00000119875 336 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm15160-201ENSMUST00000120553 907 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm4540-201ENSMUST00000170669 429 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Mir3078-201ENSMUST00000175231 87 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm20813-201ENSMUST00000186646 705 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm29663-201ENSMUST00000186962 853 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm21923-201ENSMUST00000188455 696 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm7891-201ENSMUST00000190284 843 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 Gm38201-201ENSMUST00000192143 387 ntBASIC6.96□□□□□ -1.3
Clrn1Q8K445 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms