Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm17170-201ENSMUST00000112785 316 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm7831-201ENSMUST00000117990 552 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm15188-201ENSMUST00000121264 704 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Mir3072-201ENSMUST00000175610 83 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm5080-201ENSMUST00000220341 743 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm22470-201ENSMUST00000104117 130 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm15186-201ENSMUST00000119345 563 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm11371-201ENSMUST00000120294 385 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm8215-201ENSMUST00000120627 990 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm10086-201ENSMUST00000136334 354 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm23079-201ENSMUST00000157847 117 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm24057-201ENSMUST00000158616 302 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm4956-202ENSMUST00000178869 672 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm28413-201ENSMUST00000189369 291 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm5723-201ENSMUST00000203096 432 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Snora21-201ENSMUST00000082967 137 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cchcr1Q8K2I2 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Gm11954-201ENSMUST00000121403 349 ntBASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Gm8192-201ENSMUST00000182196 958 ntBASIC8.32□□□□□ -1.08
Cchcr1Q8K2I2 Mir378d-201ENSMUST00000184232 110 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms