Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm43664-201ENSMUST00000196038 734 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm21040-201ENSMUST00000199493 1132 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm12635-201ENSMUST00000117285 752 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm18848-201ENSMUST00000182069 792 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm17790-201ENSMUST00000191545 1228 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm38373-201ENSMUST00000192042 288 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm24826-202ENSMUST00000197298 216 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm5528-201ENSMUST00000076314 480 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Gm25189-201ENSMUST00000083911 164 ntBASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.54□□□□□ -1.04
Brf1Q8CFK2 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm14893-201ENSMUST00000117904 282 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm8421-201ENSMUST00000119439 305 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm11517-201ENSMUST00000119491 387 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm5834-201ENSMUST00000126680 1026 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm24286-201ENSMUST00000157632 128 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Mir1981-201ENSMUST00000157934 82 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Mir199b-201ENSMUST00000175066 110 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm4373-201ENSMUST00000178571 556 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Mir8114-201ENSMUST00000183582 111 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm28114-201ENSMUST00000187232 379 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm38840-201ENSMUST00000204716 843 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Brf1Q8CFK2 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms