Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm7419-201ENSMUST00000209962 925 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm45506-201ENSMUST00000211620 280 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm15913-201ENSMUST00000118492 331 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm13333-201ENSMUST00000119424 781 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm13740-201ENSMUST00000120590 310 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm14380-201ENSMUST00000122298 431 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm16102-201ENSMUST00000160955 420 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm44356-201ENSMUST00000196731 111 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm7285-201ENSMUST00000198801 580 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm5791-201ENSMUST00000220840 489 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps53Q8CCB4 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Vps53Q8CCB4 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Vps53Q8CCB4 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.4□□□□□ -1.07
Vps53Q8CCB4 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.4□□□□□ -1.07
Vps53Q8CCB4 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Vps53Q8CCB4 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Vps53Q8CCB4 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Vps53Q8CCB4 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.4□□□□□ -1.07
Vps53Q8CCB4 Klf5-202ENSMUST00000226784 2852 ntBASIC8.4□□□□□ -1.07
Vps53Q8CCB4 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm11880-201ENSMUST00000117612 399 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm8916-201ENSMUST00000119732 949 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm14728-201ENSMUST00000122196 492 ntBASIC8.39□□□□□ -1.07
Vps53Q8CCB4 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps53Q8CCB4 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms