Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm11895-201ENSMUST00000122165 467 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Mir1962-201ENSMUST00000157516 121 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm23663-201ENSMUST00000158045 80 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm17129-201ENSMUST00000168168 505 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm28546-201ENSMUST00000188221 615 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm31579-201ENSMUST00000203306 966 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm44694-201ENSMUST00000205317 1298 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm4259-201ENSMUST00000206489 758 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 AC164424.3-201ENSMUST00000220809 148 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 AC166358.8-201ENSMUST00000223288 105 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 AC124739.1-201ENSMUST00000223433 148 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 AV026068-218ENSMUST00000223980 575 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 AC114573.1-201ENSMUST00000224120 1210 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 AC158531.2-201ENSMUST00000224264 473 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm10555-201ENSMUST00000193178 1791 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Gm28667-201ENSMUST00000189873 2171 ntBASIC6□□□□□ -1.45
Tsen54Q8C2A2 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Tsen54Q8C2A2 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm16420-201ENSMUST00000120258 856 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 BC002163-201ENSMUST00000121906 319 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm23117-201ENSMUST00000158482 108 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm6100-201ENSMUST00000180253 403 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm38078-201ENSMUST00000192771 392 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 AC137678.1-201ENSMUST00000198370 118 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm44245-201ENSMUST00000204304 232 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm38840-201ENSMUST00000204716 843 ntBASIC5.99□□□□□ -1.45
Tsen54Q8C2A2 Gm44823-201ENSMUST00000204775 1107 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms