Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Palmd-201ENSMUST00000040097 2433 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 AC138284.4-201ENSMUST00000216704 2882 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gramd1b-203ENSMUST00000119373 3857 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm25723-201ENSMUST00000104530 126 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm13550-201ENSMUST00000118185 525 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm7485-201ENSMUST00000119502 1109 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm11901-201ENSMUST00000120412 437 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm12005-201ENSMUST00000121451 379 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm12254-201ENSMUST00000134617 471 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim35Q8C006 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm3470-201ENSMUST00000160819 420 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm17109-201ENSMUST00000163985 358 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm20694-201ENSMUST00000176943 404 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Snora15-201ENSMUST00000177461 131 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm25314-201ENSMUST00000178810 79 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm20474-201ENSMUST00000180089 596 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm27782-201ENSMUST00000185059 199 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Scgb2b6-201ENSMUST00000188132 330 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Spin3-ps-201ENSMUST00000192825 770 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm2345-201ENSMUST00000193451 589 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm17936-201ENSMUST00000199413 988 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm4751-201ENSMUST00000200620 1105 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm44236-201ENSMUST00000204492 513 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm18646-201ENSMUST00000212240 1063 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm19790-201ENSMUST00000214414 251 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm46993-201ENSMUST00000220708 259 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm29689-201ENSMUST00000221076 589 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 AC164164.2-201ENSMUST00000221809 785 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 AC192333.6-201ENSMUST00000224565 725 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 AC131029.2-202ENSMUST00000228430 496 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 AC154738.7-201ENSMUST00000228606 579 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm9790-201ENSMUST00000054148 288 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm20743-202ENSMUST00000194322 2830 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Ablim1-206ENSMUST00000111528 2481 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Zfp655-202ENSMUST00000167316 4104 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Olfr914-202ENSMUST00000217057 4948 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Trim35Q8C006 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm18638-201ENSMUST00000211293 1773 ntBASIC9.83□□□□□ -0.84
Trim35Q8C006 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Lrrc8d-202ENSMUST00000120847 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim35Q8C006 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim35Q8C006 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim35Q8C006 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.82□□□□□ -0.84
Trim35Q8C006 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms