Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Usp47Q8BY87 Gm43235-201ENSMUST00000200121 297 ntBASIC9.99□□□□□ -0.81
Usp47Q8BY87 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC9.99□□□□□ -0.81
Usp47Q8BY87 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC9.99□□□□□ -0.81
Usp47Q8BY87 Gm9985-201ENSMUST00000044101 510 ntBASIC9.99□□□□□ -0.81
Usp47Q8BY87 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Usp47Q8BY87 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Usp47Q8BY87 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Usp47Q8BY87 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm9030-201ENSMUST00000218405 2410 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm9029-201ENSMUST00000219232 2410 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm14615-201ENSMUST00000117575 1816 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm43189-201ENSMUST00000196040 3069 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm16248-201ENSMUST00000124238 243 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm43396-201ENSMUST00000197506 706 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm44982-201ENSMUST00000208795 471 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 AC155709.1-201ENSMUST00000218794 162 ntBASIC9.98□□□□□ -0.81
Usp47Q8BY87 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp47Q8BY87 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 CT010453.1-201ENSMUST00000226795 2201 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 CT009757.6-201ENSMUST00000220661 2312 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 AC154597.1-201ENSMUST00000224095 2713 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm22256-201ENSMUST00000102291 107 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm25760-201ENSMUST00000103989 132 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm15310-201ENSMUST00000117891 372 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm15000-201ENSMUST00000118275 1243 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm14070-201ENSMUST00000120773 428 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm8089-201ENSMUST00000122463 968 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm24176-201ENSMUST00000158928 121 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Mir7033-201ENSMUST00000184259 81 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm8479-201ENSMUST00000203825 718 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm38840-201ENSMUST00000204716 843 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm19047-201ENSMUST00000220922 1099 ntBASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Usp47Q8BY87 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Usp47Q8BY87 Gm6679-201ENSMUST00000191467 1869 ntBASIC9.96□□□□□ -0.81
Usp47Q8BY87 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms