Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm44104-201ENSMUST00000204736 3777 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm44996-201ENSMUST00000208787 2980 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm25877-201ENSMUST00000104326 129 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm12713-201ENSMUST00000118404 764 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm25505-201ENSMUST00000157220 246 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm22728-201ENSMUST00000158087 129 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm16026-205ENSMUST00000162923 641 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm17022-201ENSMUST00000166415 922 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Mir6403-201ENSMUST00000185007 129 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm7369-201ENSMUST00000192738 936 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm44566-201ENSMUST00000207638 304 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.23□□□□□ -1.41
Nkx3-1P97436 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Nkx3-1P97436 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Nkx3-1P97436 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms