Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm17786-201ENSMUST00000182000 427 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm29354-201ENSMUST00000187613 696 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm43555-201ENSMUST00000196588 310 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm43331-201ENSMUST00000197991 1689 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.65□□□□□ -1.18
Shmt1P50431 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm43906-201ENSMUST00000203194 906 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm19764-201ENSMUST00000203630 649 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Shmt1P50431 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm45509-201ENSMUST00000209624 1229 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 AC132433.1-201ENSMUST00000221553 1101 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm36758-201ENSMUST00000222594 310 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Shmt1P50431 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Shmt1P50431 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.65□□□□□ -1.18
Shmt1P50431 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Gm16020-201ENSMUST00000084281 210 ntBASIC7.65□□□□□ -1.18
Shmt1P50431 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Shmt1P50431 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.19
Shmt1P50431 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Shmt1P50431 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.65□□□□□ -1.19
Shmt1P50431 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Shmt1P50431 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Shmt1P50431 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm22707-201ENSMUST00000103834 110 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm12635-201ENSMUST00000117285 752 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm10913-201ENSMUST00000133732 463 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.64□□□□□ -1.19
Shmt1P50431 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm17046-201ENSMUST00000168078 850 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.64□□□□□ -1.19
Shmt1P50431 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm28070-201ENSMUST00000191502 445 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.64□□□□□ -1.19
Shmt1P50431 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm2767-201ENSMUST00000209582 473 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm45497-201ENSMUST00000211701 740 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 AC124510.2-201ENSMUST00000221958 683 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.64□□□□□ -1.19
Shmt1P50431 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
Shmt1P50431 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Shmt1P50431 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.64□□□□□ -1.19
Shmt1P50431 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Shmt1P50431 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Shmt1P50431 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms