Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm43571-201ENSMUST00000200067 3098 ntBASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.43□□□□□ -1.22
Cxcl12P40224 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm23311-201ENSMUST00000104152 134 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm15709-201ENSMUST00000118354 213 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm11902-201ENSMUST00000118849 270 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm5255-201ENSMUST00000120125 642 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm18006-201ENSMUST00000177411 662 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm27601-201ENSMUST00000184794 127 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm37072-201ENSMUST00000194570 837 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm45734-201ENSMUST00000211916 411 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm6575-201ENSMUST00000222946 697 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Cxcl12P40224 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Cxcl12P40224 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.42□□□□□ -1.22
Cxcl12P40224 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC7.42□□□□□ -1.22
Cxcl12P40224 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.42□□□□□ -1.22
Cxcl12P40224 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.42□□□□□ -1.22
Cxcl12P40224 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.42□□□□□ -1.22
Cxcl12P40224 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Cxcl12P40224 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm5182-201ENSMUST00000217708 6092 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm24069-201ENSMUST00000104512 127 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm15203-201ENSMUST00000117668 455 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm7189-201ENSMUST00000119811 429 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm5125-201ENSMUST00000148614 624 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.41□□□□□ -1.22
Cxcl12P40224 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Cxcl12P40224 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Cxcl12P40224 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.4□□□□□ -1.22
Cxcl12P40224 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Cxcl12P40224 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Cxcl12P40224 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Cxcl12P40224 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Cxcl12P40224 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Cxcl12P40224 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.4□□□□□ -1.22
Cxcl12P40224 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Cxcl12P40224 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Cxcl12P40224 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Cxcl12P40224 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms