Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp4P35123 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm22424-201ENSMUST00000158527 87 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp4P35123 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm28006-201ENSMUST00000183841 122 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm37585-201ENSMUST00000195440 280 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm18207-201ENSMUST00000205486 526 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm44690-201ENSMUST00000207984 382 ntBASIC7.72□□□□□ -1.17
Usp4P35123 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp4P35123 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.72□□□□□ -1.17
Usp4P35123 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp4P35123 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp4P35123 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp4P35123 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.72□□□□□ -1.17
Usp4P35123 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Usp4P35123 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp4P35123 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp4P35123 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Usp4P35123 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.71□□□□□ -1.17
Usp4P35123 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
Usp4P35123 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Usp4P35123 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Usp4P35123 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp4P35123 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Usp4P35123 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.71□□□□□ -1.17
Usp4P35123 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.71□□□□□ -1.17
Usp4P35123 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Usp4P35123 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp4P35123 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Usp4P35123 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Usp4P35123 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Usp4P35123 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm23484-201ENSMUST00000104178 131 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm17184-201ENSMUST00000111864 462 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm15422-201ENSMUST00000117453 541 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm15665-201ENSMUST00000119116 847 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm15186-201ENSMUST00000119345 563 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm14053-201ENSMUST00000121662 470 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm12754-201ENSMUST00000121908 454 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm22670-201ENSMUST00000158724 143 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm8529-201ENSMUST00000183298 745 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm3121-201ENSMUST00000187086 406 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm28114-201ENSMUST00000187232 379 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm29562-201ENSMUST00000190113 904 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm6140-201ENSMUST00000192494 966 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm37689-201ENSMUST00000193139 275 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm42464-202ENSMUST00000198111 774 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm44038-201ENSMUST00000203952 889 ntBASIC7.71□□□□□ -1.18
Usp4P35123 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Gm20586-201ENSMUST00000210122 547 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm8804-201ENSMUST00000212292 798 ntBASIC7.71□□□□□ -1.18
Usp4P35123 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms