Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.32□□□□□ -1.4
P20040 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
P20040 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.31□□□□□ -1.4
P20040 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.31□□□□□ -1.4
P20040 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.31□□□□□ -1.4
P20040 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
P20040 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.31□□□□□ -1.4
P20040 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.31□□□□□ -1.4
P20040 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.31□□□□□ -1.4
P20040 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
P20040 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.31□□□□□ -1.4
P20040 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
P20040 Gm13137-201ENSMUST00000118035 345 ntBASIC6.31□□□□□ -1.4
P20040 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.31□□□□□ -1.4
P20040 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.31□□□□□ -1.4
P20040 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6.31□□□□□ -1.4
P20040 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.31□□□□□ -1.4
P20040 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.31□□□□□ -1.4
P20040 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.31□□□□□ -1.4
P20040 Gm8046-201ENSMUST00000172151 616 ntBASIC6.31□□□□□ -1.4
P20040 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.31□□□□□ -1.4
P20040 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.31□□□□□ -1.4
P20040 Gm4308-201ENSMUST00000179735 914 ntBASIC6.31□□□□□ -1.4
P20040 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
P20040 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
P20040 Gm37270-201ENSMUST00000194277 330 ntBASIC6.31□□□□□ -1.4
P20040 Gm18428-201ENSMUST00000194986 791 ntBASIC6.31□□□□□ -1.4
P20040 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Gm45319-201ENSMUST00000210220 318 ntBASIC6.31□□□□□ -1.4
P20040 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.31□□□□□ -1.4
P20040 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.31□□□□□ -1.4
P20040 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.31□□□□□ -1.4
P20040 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.31□□□□□ -1.4
P20040 Diaph3-204ENSMUST00000226254 682 ntBASIC6.31□□□□□ -1.4
P20040 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
P20040 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
P20040 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.31□□□□□ -1.4
P20040 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.31□□□□□ -1.4
P20040 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
P20040 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
P20040 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.3□□□□□ -1.4
P20040 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.3□□□□□ -1.4
P20040 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.3□□□□□ -1.4
P20040 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
P20040 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
P20040 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
P20040 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
P20040 Gm25614-201ENSMUST00000104013 133 ntBASIC6.3□□□□□ -1.4
P20040 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.3□□□□□ -1.4
P20040 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.3□□□□□ -1.4
P20040 Gm14248-201ENSMUST00000117790 544 ntBASIC6.3□□□□□ -1.4
P20040 Gm8215-201ENSMUST00000120627 990 ntBASIC6.3□□□□□ -1.4
P20040 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.3□□□□□ -1.4
P20040 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.3□□□□□ -1.4
P20040 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
P20040 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
P20040 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
P20040 Gm36991-201ENSMUST00000191800 648 ntBASIC6.3□□□□□ -1.4
P20040 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.3□□□□□ -1.4
P20040 Gm43725-201ENSMUST00000200122 369 ntBASIC6.3□□□□□ -1.4
P20040 Gm34583-203ENSMUST00000202586 454 ntBASIC6.3□□□□□ -1.4
P20040 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.3□□□□□ -1.4
P20040 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.3□□□□□ -1.4
P20040 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.3□□□□□ -1.4
P20040 Gm18503-201ENSMUST00000220340 728 ntBASIC6.3□□□□□ -1.4
P20040 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.3□□□□□ -1.4
P20040 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.3□□□□□ -1.4
P20040 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
P20040 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms