Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Sdc1P18828 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Thap6-201ENSMUST00000191860 3151 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sdc1P18828 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm14631-201ENSMUST00000119067 594 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm15842-201ENSMUST00000120513 618 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm23094-201ENSMUST00000157551 322 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm26323-201ENSMUST00000157743 175 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC5.68□□□□□ -1.5
Sdc1P18828 Mir6340-201ENSMUST00000183857 119 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm5541-201ENSMUST00000193248 1113 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm43815-201ENSMUST00000197676 990 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm8948-201ENSMUST00000216371 370 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm18601-201ENSMUST00000220831 634 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm40853-201ENSMUST00000221342 582 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Gm9255-201ENSMUST00000223225 581 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 AC154649.2-201ENSMUST00000228189 808 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 CT009550.3-201ENSMUST00000228542 455 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sdc1P18828 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.68□□□□□ -1.5
Sdc1P18828 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sdc1P18828 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.68□□□□□ -1.5
Sdc1P18828 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Sdc1P18828 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sdc1P18828 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 CT573019.1-201ENSMUST00000227762 1689 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm23908-201ENSMUST00000104599 132 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm13469-201ENSMUST00000118231 350 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Gm11318-201ENSMUST00000118640 961 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Gm12583-201ENSMUST00000120677 853 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Gm16248-201ENSMUST00000124238 243 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Mir1968-201ENSMUST00000157429 68 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Gm8877-201ENSMUST00000172657 655 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm20945-201ENSMUST00000178122 1145 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm5787-201ENSMUST00000183049 1038 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Gm7436-201ENSMUST00000187229 391 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC5.67□□□□□ -1.5
Sdc1P18828 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Sdc1P18828 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms