Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm2531-201ENSMUST00000075609 512 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 AC126028.1-201ENSMUST00000226218 2123 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Pcdh1F7BJK1 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm23426-201ENSMUST00000122483 318 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm22342-201ENSMUST00000122647 298 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm26000-201ENSMUST00000157991 107 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm23897-201ENSMUST00000158110 158 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm23633-201ENSMUST00000175293 119 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm28614-201ENSMUST00000186483 458 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm29041-201ENSMUST00000189199 380 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm37247-201ENSMUST00000192549 730 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm37187-201ENSMUST00000193425 341 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm43555-201ENSMUST00000196588 310 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm6394-201ENSMUST00000197077 477 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm20223-201ENSMUST00000199932 805 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm44743-201ENSMUST00000209062 386 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm19987-201ENSMUST00000216339 499 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm19174-201ENSMUST00000216944 956 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm4825-201ENSMUST00000079690 408 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Pcdh1F7BJK1 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Pcdh1F7BJK1 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Pcdh1F7BJK1 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Pcdh1F7BJK1 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Pcdh1F7BJK1 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Pcdh1F7BJK1 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Pcdh1F7BJK1 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Pcdh1F7BJK1 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Pcdh1F7BJK1 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms