Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm15109-201ENSMUST00000133085 2026 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Klf5-202ENSMUST00000226784 2852 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm8916-201ENSMUST00000119732 949 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm14728-201ENSMUST00000122196 492 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm27218-201ENSMUST00000183745 392 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Mir8097-201ENSMUST00000185150 119 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm45446-201ENSMUST00000209348 216 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm7419-201ENSMUST00000209962 925 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm18860-201ENSMUST00000212029 764 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm10623-201ENSMUST00000209081 2639 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm5255-201ENSMUST00000120125 642 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm5283-201ENSMUST00000177874 334 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm38079-201ENSMUST00000195603 154 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm43555-201ENSMUST00000196588 310 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm7285-201ENSMUST00000198801 580 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm44258-201ENSMUST00000204925 301 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm18559-201ENSMUST00000208249 604 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm2767-201ENSMUST00000209582 473 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cdc40Q9DC48 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms