Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm7435-202ENSMUST00000216003 2424 ntBASIC8.31□□□□□ -1.08
Clp1Q99LI9 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Clp1Q99LI9 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm9776-201ENSMUST00000059598 2980 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm28720-201ENSMUST00000190728 3156 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm12535-201ENSMUST00000121025 484 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm14905-201ENSMUST00000122351 639 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm24236-201ENSMUST00000157794 134 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm4850-201ENSMUST00000185684 559 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm46136-201ENSMUST00000214730 565 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm9249-201ENSMUST00000221420 578 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm22043-201ENSMUST00000082993 158 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm26003-201ENSMUST00000083061 113 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.3□□□□□ -1.08
Clp1Q99LI9 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Clp1Q99LI9 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 CT009723.1-201ENSMUST00000215057 1803 ntTSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm5316-202ENSMUST00000185734 3096 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Clp1Q99LI9 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm5135-201ENSMUST00000121100 573 ntBASIC8.29□□□□□ -1.08
Clp1Q99LI9 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.29□□□□□ -1.08
Clp1Q99LI9 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms