Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC9.24□□□□□ -0.93
RtcbQ99LF4 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RtcbQ99LF4 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
RtcbQ99LF4 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RtcbQ99LF4 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
RtcbQ99LF4 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RtcbQ99LF4 Gm5402-201ENSMUST00000119588 1618 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm19028-201ENSMUST00000189614 1873 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm26417-201ENSMUST00000104274 135 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm15709-201ENSMUST00000118354 213 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm3025-201ENSMUST00000163454 489 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm3077-201ENSMUST00000165903 627 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm2878-201ENSMUST00000170173 486 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm9286-201ENSMUST00000173586 508 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 n-R5s93-201ENSMUST00000180091 119 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm26784-201ENSMUST00000181666 410 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Mir378d-201ENSMUST00000184232 110 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm29143-201ENSMUST00000189462 201 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm38201-201ENSMUST00000192143 387 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm37901-201ENSMUST00000195107 514 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm44162-201ENSMUST00000203543 544 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm8703-201ENSMUST00000203793 730 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm18255-201ENSMUST00000211316 765 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 AC158981.3-201ENSMUST00000226844 1024 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm22581-201ENSMUST00000083735 136 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm43080-201ENSMUST00000199006 2643 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm19210-201ENSMUST00000199562 1350 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Gm42572-201ENSMUST00000202292 3378 ntBASIC9.23□□□□□ -0.93
RtcbQ99LF4 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
RtcbQ99LF4 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RtcbQ99LF4 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm4962-201ENSMUST00000199640 2977 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm9144-201ENSMUST00000101625 1008 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm22728-201ENSMUST00000158087 129 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm17022-201ENSMUST00000166415 922 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm4202-201ENSMUST00000169025 733 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Olfr1055-202ENSMUST00000188023 939 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm28466-201ENSMUST00000190678 659 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm37841-201ENSMUST00000195367 376 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm8896-201ENSMUST00000197434 1106 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm42619-201ENSMUST00000197564 1136 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC9.22□□□□□ -0.93
RtcbQ99LF4 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC9.22□□□□□ -0.93
RtcbQ99LF4 Gm44694-201ENSMUST00000205317 1298 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms