Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Brf1Q8CFK2 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm25180-201ENSMUST00000157746 115 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm46424-201ENSMUST00000221567 168 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Snora21-201ENSMUST00000082967 137 ntBASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Brf1Q8CFK2 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm12740-201ENSMUST00000118794 308 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm13744-201ENSMUST00000118953 850 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm12477-201ENSMUST00000121221 571 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm17786-201ENSMUST00000182000 427 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm5244-202ENSMUST00000189517 743 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm44982-201ENSMUST00000208795 471 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm17872-201ENSMUST00000222550 532 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Brf1Q8CFK2 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm26416-201ENSMUST00000104280 134 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm15105-201ENSMUST00000117777 204 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm13196-201ENSMUST00000118297 379 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm16418-201ENSMUST00000118577 171 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm24228-201ENSMUST00000158829 129 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm7418-201ENSMUST00000162120 801 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm7244-201ENSMUST00000164658 455 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm28413-201ENSMUST00000189369 291 ntBASIC8.55□□□□□ -1.04
Brf1Q8CFK2 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.55□□□□□ -1.04
Brf1Q8CFK2 Gm36935-201ENSMUST00000192526 292 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms