Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc87Q8CDL9 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc87Q8CDL9 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc87Q8CDL9 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.71□□□□□ -1.18
Ccdc87Q8CDL9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc87Q8CDL9 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Klf5-202ENSMUST00000226784 2852 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm6490-201ENSMUST00000111862 461 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm13006-201ENSMUST00000118683 214 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm6382-201ENSMUST00000118873 942 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm11370-201ENSMUST00000120583 260 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm25178-201ENSMUST00000122633 325 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm5611-201ENSMUST00000164523 852 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm22408-201ENSMUST00000174925 65 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Mir199b-201ENSMUST00000175066 110 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Mir6340-201ENSMUST00000183857 119 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm37295-201ENSMUST00000192186 109 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm6197-201ENSMUST00000192273 454 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm17965-201ENSMUST00000193904 517 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm6649-201ENSMUST00000199743 1165 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm43108-201ENSMUST00000200525 293 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm44380-201ENSMUST00000203125 293 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm45885-202ENSMUST00000211520 1383 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Malat1-201ENSMUST00000172812 6983 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc87Q8CDL9 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm37426-201ENSMUST00000195241 2470 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm14938-201ENSMUST00000119482 943 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm11188-201ENSMUST00000122382 388 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Mir6921-201ENSMUST00000183719 80 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm35108-201ENSMUST00000194321 699 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm33191-201ENSMUST00000195604 699 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm43725-201ENSMUST00000200122 369 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm5723-201ENSMUST00000203096 432 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.69□□□□□ -1.18
Ccdc87Q8CDL9 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms