Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm7244-201ENSMUST00000164658 455 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm29008-201ENSMUST00000189387 298 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm18690-201ENSMUST00000204488 985 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm18469-201ENSMUST00000208850 439 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.43□□□□□ -1.06
Vps53Q8CCB4 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm13438-201ENSMUST00000120100 573 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm11343-201ENSMUST00000120579 599 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm5445-201ENSMUST00000180224 480 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Pea15b-201ENSMUST00000182806 387 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm43555-201ENSMUST00000196588 310 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm2505-201ENSMUST00000200413 825 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm9604-201ENSMUST00000211175 433 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gm2089-201ENSMUST00000218294 479 ntBASIC8.42□□□□□ -1.06
Vps53Q8CCB4 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC8.42□□□□□ -1.06
Vps53Q8CCB4 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm24541-201ENSMUST00000103871 96 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm15739-201ENSMUST00000118049 872 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm12375-201ENSMUST00000119331 921 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm2619-202ENSMUST00000166777 651 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm7481-201ENSMUST00000182020 995 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm9127-201ENSMUST00000188041 985 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.41□□□□□ -1.06
Vps53Q8CCB4 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.41□□□□□ -1.06
Vps53Q8CCB4 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms