Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm17022-201ENSMUST00000166415 922 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm5361-201ENSMUST00000211041 1498 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm22774-201ENSMUST00000102084 109 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm13137-201ENSMUST00000118035 345 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm9439-201ENSMUST00000119554 973 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm13221-201ENSMUST00000121712 430 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm26528-201ENSMUST00000181965 283 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm28958-201ENSMUST00000185864 703 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 AC131710.2-201ENSMUST00000226773 683 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Atg4aQ8C9S8 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm17184-201ENSMUST00000111864 462 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm14869-201ENSMUST00000119007 884 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm15586-201ENSMUST00000121218 528 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm23027-201ENSMUST00000158771 158 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Mir6241-201ENSMUST00000184225 103 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm9114-201ENSMUST00000188558 997 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Gm9315-201ENSMUST00000222696 908 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.54□□□□□ -1.04
Atg4aQ8C9S8 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Atg4aQ8C9S8 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms