Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc60Q8C4J0 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm13221-201ENSMUST00000121712 430 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Mir199b-201ENSMUST00000175066 110 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm25640-201ENSMUST00000175378 125 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm38170-201ENSMUST00000195404 816 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm30517-201ENSMUST00000197350 772 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm3511-201ENSMUST00000199823 204 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm38840-201ENSMUST00000204716 843 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm44565-201ENSMUST00000208194 269 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm45725-201ENSMUST00000212962 337 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc60Q8C4J0 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm22774-201ENSMUST00000102084 109 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm25396-201ENSMUST00000103981 133 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm16044-201ENSMUST00000118475 450 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm15081-201ENSMUST00000119794 844 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm14728-201ENSMUST00000122196 492 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm2976-201ENSMUST00000160362 513 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Mir6241-201ENSMUST00000184225 103 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm7412-201ENSMUST00000191692 605 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm18430-201ENSMUST00000197534 682 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm2860-201ENSMUST00000199226 707 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc60Q8C4J0 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Ccdc60Q8C4J0 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccdc60Q8C4J0 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms