Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Ccdc40Q8BI79 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm23701-201ENSMUST00000103893 110 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm22438-201ENSMUST00000104049 132 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm12344-201ENSMUST00000117087 329 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm6491-201ENSMUST00000118273 990 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm5255-201ENSMUST00000120125 642 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm37225-201ENSMUST00000193423 325 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm43590-201ENSMUST00000195987 387 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm44471-201ENSMUST00000197963 100 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm7285-201ENSMUST00000198801 580 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Ccdc40Q8BI79 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm23484-201ENSMUST00000104178 131 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm24373-201ENSMUST00000104393 132 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm11810-201ENSMUST00000118311 333 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm13742-201ENSMUST00000118805 457 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm11928-201ENSMUST00000119323 437 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm22795-201ENSMUST00000157233 118 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc40Q8BI79 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms