Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm12174-201ENSMUST00000119853 813 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm26025-201ENSMUST00000158655 271 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm6434-201ENSMUST00000163316 372 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm27185-201ENSMUST00000184296 247 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm2221-201ENSMUST00000209342 418 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm31711-201ENSMUST00000220687 196 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm5446-201ENSMUST00000091762 784 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm22533-201ENSMUST00000158821 274 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm16138-201ENSMUST00000159341 821 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm17212-201ENSMUST00000166666 259 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm3760-201ENSMUST00000167475 804 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm28958-201ENSMUST00000185864 703 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm37526-201ENSMUST00000194640 619 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm18430-201ENSMUST00000197534 682 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 AC155270.1-202ENSMUST00000221503 352 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.48□□□□□ -1.05
Vps54Q5SPW0 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Vps54Q5SPW0 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 1330.9 ms