Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.8□□□□□ -1.16
CiitaP79621 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.8□□□□□ -1.16
CiitaP79621 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Gm44508-201ENSMUST00000206943 1157 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Gm6419-201ENSMUST00000097166 429 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.8□□□□□ -1.16
CiitaP79621 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.8□□□□□ -1.16
CiitaP79621 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CiitaP79621 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.8□□□□□ -1.16
CiitaP79621 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Malat1-201ENSMUST00000172812 6983 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.79□□□□□ -1.16
CiitaP79621 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.79□□□□□ -1.16
CiitaP79621 Gm8812-201ENSMUST00000118496 412 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Gm9439-201ENSMUST00000119554 973 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Gm26025-201ENSMUST00000158655 271 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.79□□□□□ -1.16
CiitaP79621 Gm27185-201ENSMUST00000184296 247 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Gm27178-201ENSMUST00000184962 340 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.79□□□□□ -1.16
CiitaP79621 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.79□□□□□ -1.16
CiitaP79621 Gm6562-201ENSMUST00000221903 464 ntBASIC7.79□□□□□ -1.16
CiitaP79621 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.79□□□□□ -1.16
CiitaP79621 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.79□□□□□ -1.16
CiitaP79621 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.79□□□□□ -1.16
CiitaP79621 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Gm5528-201ENSMUST00000076314 480 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CiitaP79621 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CiitaP79621 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CiitaP79621 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CiitaP79621 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CiitaP79621 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CiitaP79621 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CiitaP79621 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.79□□□□□ -1.16
CiitaP79621 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CiitaP79621 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CiitaP79621 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CiitaP79621 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CiitaP79621 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CiitaP79621 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CiitaP79621 Gm22781-201ENSMUST00000104083 137 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm13196-201ENSMUST00000118297 379 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm14869-201ENSMUST00000119007 884 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm15081-201ENSMUST00000119794 844 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm7746-201ENSMUST00000120966 503 ntBASIC7.78□□□□□ -1.16
CiitaP79621 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms