Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm18972-201ENSMUST00000218873 630 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox3P53784 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.93□□□□□ -1.3
Sox3P53784 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Sox3P53784 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Sox3P53784 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.92□□□□□ -1.3
Sox3P53784 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Sox3P53784 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Sox3P53784 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Sox3P53784 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.92□□□□□ -1.3
Sox3P53784 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Gm25093-201ENSMUST00000103993 132 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm6142-201ENSMUST00000120290 325 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Gm25782-201ENSMUST00000122526 289 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.92□□□□□ -1.3
Sox3P53784 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm6074-201ENSMUST00000193340 451 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm4525-201ENSMUST00000198831 254 ntBASIC6.92□□□□□ -1.3
Sox3P53784 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.92□□□□□ -1.3
Sox3P53784 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm9267-201ENSMUST00000222831 404 ntBASIC6.92□□□□□ -1.3
Sox3P53784 AC173482.3-201ENSMUST00000225492 1212 ntBASIC6.92□□□□□ -1.3
Sox3P53784 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Sox3P53784 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Gm22684-201ENSMUST00000082849 132 ntBASIC6.92□□□□□ -1.3
Sox3P53784 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Sox3P53784 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.92□□□□□ -1.3
Sox3P53784 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.92□□□□□ -1.3
Sox3P53784 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Sox3P53784 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Sox3P53784 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Sox3P53784 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.91□□□□□ -1.3
Sox3P53784 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Sox3P53784 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Sox3P53784 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Sox3P53784 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm15913-201ENSMUST00000118492 331 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm11370-201ENSMUST00000120583 260 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm12477-201ENSMUST00000121221 571 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm13828-201ENSMUST00000122278 363 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Sox3P53784 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.91□□□□□ -1.3
Sox3P53784 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Sox3P53784 Gm21877-201ENSMUST00000185640 694 ntBASIC6.91□□□□□ -1.3
Sox3P53784 Gm7369-201ENSMUST00000192738 936 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms