Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Gm7931-201ENSMUST00000121537 271 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.25□□□□□ -1.25
HttP42859 Gm9529-201ENSMUST00000177598 579 ntBASIC7.25□□□□□ -1.25
HttP42859 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HttP42859 Mir6348-201ENSMUST00000183804 120 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm27853-201ENSMUST00000184176 250 ntBASIC7.25□□□□□ -1.25
HttP42859 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.25□□□□□ -1.25
HttP42859 Gm18839-201ENSMUST00000204292 670 ntBASIC7.25□□□□□ -1.25
HttP42859 AC122332.1-201ENSMUST00000214384 285 ntBASIC7.25□□□□□ -1.25
HttP42859 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.25□□□□□ -1.25
HttP42859 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HttP42859 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.25□□□□□ -1.25
HttP42859 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.25□□□□□ -1.25
HttP42859 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.25□□□□□ -1.25
HttP42859 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
HttP42859 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
HttP42859 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm12768-201ENSMUST00000120055 759 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC7.25□□□□□ -1.25
HttP42859 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
HttP42859 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Gm28620-201ENSMUST00000190463 439 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm17824-201ENSMUST00000197690 805 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm43631-201ENSMUST00000202011 369 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.25□□□□□ -1.25
HttP42859 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.25□□□□□ -1.25
HttP42859 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.25□□□□□ -1.25
HttP42859 Gm40598-201ENSMUST00000222953 547 ntBASIC7.25□□□□□ -1.25
HttP42859 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.25□□□□□ -1.25
HttP42859 AC154626.1-201ENSMUST00000226070 311 ntBASIC7.25□□□□□ -1.25
HttP42859 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.25□□□□□ -1.25
HttP42859 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Mir331-201ENSMUST00000083673 96 ntBASIC7.25□□□□□ -1.25
HttP42859 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
HttP42859 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Gm3053-201ENSMUST00000161709 616 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
HttP42859 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
HttP42859 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Gm38181-201ENSMUST00000181357 720 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm28080-201ENSMUST00000188552 722 ntBASIC7.24□□□□□ -1.25
HttP42859 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.24□□□□□ -1.25
HttP42859 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm45432-201ENSMUST00000210391 416 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm6049-201ENSMUST00000222369 458 ntBASIC7.24□□□□□ -1.25
HttP42859 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Gm29113-201ENSMUST00000185991 3432 ntBASIC7.24□□□□□ -1.25
HttP42859 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
HttP42859 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Gm21043-201ENSMUST00000199316 1517 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
HttP42859 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Gm11443-201ENSMUST00000118790 479 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm7058-201ENSMUST00000119209 902 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm14614-201ENSMUST00000119873 384 ntBASIC7.24□□□□□ -1.25
HttP42859 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC7.24□□□□□ -1.25
HttP42859 Gm8321-201ENSMUST00000181691 980 ntBASIC7.24□□□□□ -1.25
HttP42859 Igkv4-56-201ENSMUST00000198436 349 ntBASIC7.24□□□□□ -1.25
HttP42859 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Rybp-ps-201ENSMUST00000069489 681 ntBASIC7.24□□□□□ -1.25
HttP42859 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
HttP42859 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
HttP42859 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms