Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col2a1P28481 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col2a1P28481 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 AC161247.1-201ENSMUST00000217744 2295 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm13006-201ENSMUST00000118683 214 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC8.06□□□□□ -1.12
Col2a1P28481 Mir6911-201ENSMUST00000184241 69 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm29470-201ENSMUST00000188007 696 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm36965-201ENSMUST00000193797 394 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 Gm3678-201ENSMUST00000218888 492 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.06□□□□□ -1.12
Col2a1P28481 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Col2a1P28481 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col2a1P28481 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Col2a1P28481 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col2a1P28481 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 AC132465.1-201ENSMUST00000219938 1307 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.05□□□□□ -1.12
Col2a1P28481 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Gm11622-201ENSMUST00000120525 691 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.05□□□□□ -1.12
Col2a1P28481 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Gm8192-201ENSMUST00000182196 958 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Gm44982-201ENSMUST00000208795 471 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8.05□□□□□ -1.12
Col2a1P28481 AC167013.4-201ENSMUST00000226712 317 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 AC166574.3-201ENSMUST00000226725 367 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col2a1P28481 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
Col2a1P28481 Gm11590-201ENSMUST00000118999 1455 ntBASIC8.05□□□□□ -1.12
Col2a1P28481 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Col2a1P28481 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col2a1P28481 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col2a1P28481 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.04□□□□□ -1.12
Col2a1P28481 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col2a1P28481 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col2a1P28481 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 500.8 ms