Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm8686-201ENSMUST00000203028 388 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm45070-201ENSMUST00000208100 246 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC5.7□□□□□ -1.5
Sdc1P18828 AC164614.1-201ENSMUST00000216038 397 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 AC154382.1-201ENSMUST00000220958 1282 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm8616-201ENSMUST00000222175 1037 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 AC154785.1-201ENSMUST00000223280 572 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 AC159205.2-201ENSMUST00000223759 816 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Sdc1P18828 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Sdc1P18828 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Sdc1P18828 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Sdc1P18828 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sdc1P18828 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm15048-201ENSMUST00000118201 954 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm11220-201ENSMUST00000118844 475 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm5883-201ENSMUST00000120735 495 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm12967-201ENSMUST00000122147 289 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC5.69□□□□□ -1.5
Sdc1P18828 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC5.69□□□□□ -1.5
Sdc1P18828 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sdc1P18828 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm3142-201ENSMUST00000190107 414 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm34583-203ENSMUST00000202586 454 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC5.69□□□□□ -1.5
Sdc1P18828 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm19228-201ENSMUST00000214030 717 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 AC134869.2-201ENSMUST00000225788 421 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 AC110176.1-201ENSMUST00000226219 504 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 AC113178.1-201ENSMUST00000227616 935 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 AC154738.3-201ENSMUST00000227953 409 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm10029-201ENSMUST00000089635 330 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sdc1P18828 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.69□□□□□ -1.5
Sdc1P18828 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sdc1P18828 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sdc1P18828 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms