Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm16027-201ENSMUST00000161618 758 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm18501-201ENSMUST00000185363 664 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.75□□□□□ -1.17
Chmp6P0C0A3 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm22438-201ENSMUST00000104049 132 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm11517-201ENSMUST00000119491 387 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm14787-201ENSMUST00000121236 388 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm6428-201ENSMUST00000161062 345 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm5611-201ENSMUST00000164523 852 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm27596-201ENSMUST00000185061 83 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm18699-201ENSMUST00000190713 243 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm7341-201ENSMUST00000192183 926 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm43664-201ENSMUST00000196038 734 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm29759-201ENSMUST00000205860 327 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm8058-201ENSMUST00000217247 587 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.74□□□□□ -1.17
Chmp6P0C0A3 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms