Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim3Q9R1R2 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm11928-201ENSMUST00000119323 437 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm13525-201ENSMUST00000120607 478 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm13776-201ENSMUST00000122236 1261 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm14380-201ENSMUST00000122298 431 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm21430-201ENSMUST00000182998 998 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm18428-201ENSMUST00000194986 791 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm45319-201ENSMUST00000210220 318 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim3Q9R1R2 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.77□□□□□ -1.32
Trim3Q9R1R2 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Trim3Q9R1R2 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Trim3Q9R1R2 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Mir503-201ENSMUST00000102168 71 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm25614-201ENSMUST00000104013 133 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm15913-201ENSMUST00000118492 331 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm4605-201ENSMUST00000203148 625 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm45432-201ENSMUST00000210391 416 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Gm32899-201ENSMUST00000219694 207 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim3Q9R1R2 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.77□□□□□ -1.33
Trim3Q9R1R2 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms