Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm16044-201ENSMUST00000118475 450 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm12944-201ENSMUST00000119262 463 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm11257-201ENSMUST00000121313 315 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm14990-201ENSMUST00000122354 445 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm23657-201ENSMUST00000122623 294 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm25180-201ENSMUST00000157746 115 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm23077-201ENSMUST00000157854 116 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm16026-205ENSMUST00000162923 641 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm18848-201ENSMUST00000182069 792 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm27684-201ENSMUST00000183778 80 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm8101-201ENSMUST00000192796 478 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm8539-201ENSMUST00000199822 501 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm45042-201ENSMUST00000207377 211 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm2840-201ENSMUST00000048361 411 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp2aQ9DB34 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm24048-201ENSMUST00000102411 106 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm25757-201ENSMUST00000103986 123 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm23437-201ENSMUST00000104036 127 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm8812-201ENSMUST00000118496 412 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm26323-201ENSMUST00000157743 175 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm24057-201ENSMUST00000158616 302 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Mir378d-201ENSMUST00000184232 110 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm37017-201ENSMUST00000195266 747 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm18860-201ENSMUST00000212029 764 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm9110-201ENSMUST00000219035 617 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.41□□□□□ -1.22
Chmp2aQ9DB34 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms